In the Video volume of my Synology NAS I have approx 100 videos.
Inside this volume I defined a small number of folders
What I see with Infuse is only a small selection of the complete list of videos in the top level of the volume.
Infuse seems to pick videos from various folders without any logic.
I have no idea why and also not how to get access to all my videos through Infuse.
First, are you actually running Infuse with aTV Flash for Apple TV on a 2nd Generation (black) Apple TV?
Infuse is designed to flatten folders with a single file so that may be what your seeing.
The problem seems to be resolved by Wondershare.
I asked them the same question. After a couple of days I got a new version, which creates a proper Apple file name including the film title.
The only “homework” for me is to trash all the VTS_01 films and convert them again.
Now THAT could be a problem that would cause you to pull your hair out! Glad you got it straightened out.